Step 1: Work in centimetres and grams instead of metres and kilograms.
Since $1\ \mu m = 10^{-4}\ cm$, the cylinder's radius is $r = 0.5\times10^{-4}\ cm = 5\times10^{-5}\ cm$, and its height is $h = 10^{-4}\ cm$. Water's density in these units is a clean number, $\rho = 1\ g/cm^3$.
Step 2: Find the cylinder volume.
\[ V_{cyl} = \pi r^2 h = \pi (5\times10^{-5})^2(10^{-4}) = \pi(2.5\times10^{-9})(10^{-4}) = 2.5\pi\times10^{-13}\ cm^3 \]
Numerically, $V_{cyl} \approx 7.85\times10^{-13}\ cm^3$.
Step 3: Add the two hemispherical caps as one sphere.
\[ V_{sph} = \frac{4}{3}\pi r^3 = \frac{4}{3}\pi(5\times10^{-5})^3 = \frac{4}{3}\pi(1.25\times10^{-13}) \approx 5.24\times10^{-13}\ cm^3 \]
Step 4: Add the two volumes.
\[ V_{total} \approx 7.85\times10^{-13}+5.24\times10^{-13} = 1.31\times10^{-12}\ cm^3 \]
Step 5: Convert straight to mass, since $\rho=1\ g/cm^3$.
\[ m = \rho V \approx 1.31\times10^{-12}\ g \]
Step 6: Convert grams back to kilograms to compare with the options.
\[ m \approx 1.31\times10^{-12}\ g = 1.31\times10^{-15}\ kg \]
This confirms the same answer reached by working directly in SI units, the choice of unit system does not change the physical mass, only how the number looks partway through.
Step 7: Conclude.
\[ \boxed{10^{-15}\ kg} \]