Step 1: Picture the situation.
Water is poured into a cylinder whose base radius stays fixed at $3$ m. As water fills, only the height of the water rises. We must find how fast the height rises.
Step 2: Note the given rates.
Volume is being added at $\frac{dV}{dt}=36\ \text{m}^3/\text{min}$. The radius is constant, $r=3$ m. We want $\frac{dh}{dt}$.
Step 3: Write the volume formula.
For a cylinder, $V=\pi r^2 h$. Since the radius does not change, only $h$ changes with time.
Step 4: Put the fixed radius in.
\[ V=\pi(3)^2 h=9\pi h. \] Now $V$ depends only on $h$, which keeps things simple.
Step 5: Differentiate with respect to time.
Because both volume and height change with time, we take $\frac{d}{dt}$ of both sides. The number $9\pi$ stays put. \[ \frac{dV}{dt}=9\pi\,\frac{dh}{dt}. \]
Step 6: Plug in the known rate.
\[ 36=9\pi\,\frac{dh}{dt}. \]
Step 7: Solve for the height rate.
\[ \frac{dh}{dt}=\frac{36}{9\pi}=\frac{4}{\pi}\ \text{m/min}. \] This matches option (2).
\[ \boxed{\dfrac{4}{\pi}\ \text{m/min}} \]