Step 1: Use the Square Formula
For $\vec{u}=m\vec{p}+n\vec{q}$, $|\vec{u}|^{2}=4m^{2}+4n^{2}+2mn(\vec{p}\cdot\vec{q})=4m^{2}+4n^{2}+4mn$.
Step 2: Substitute
For $\vec{a}$: $m=3,n=-1$, giving $36+4-12=28$. For $\vec{b}$: $m=1,n=3$, giving $4+36+12=52$.
Step 3: Compare
$\dfrac{|\vec{a}|^{2}}{|\vec{b}|^{2}}=\dfrac{28}{52}=\dfrac{7}{13}$, so the ratio is $\sqrt{7}:\sqrt{13}$.
Final Answer:
The magnitudes are in the ratio root 7 to root 13.
\[ \boxed{\text{(B) }\sqrt{7}:\sqrt{13}} \]